Gday John
I was going to suggest he contact you about this. I agree with what you and jarrah jack have said. If there is thick glass on the sides and only a thin sheet of plywood then just focus on the middle section.
This will be an easy transom rebuild..... just cut the skin drop the new ply, epoxy old skin and then glass the bevel. He should be able to get all that wood out without damaging the inner skin as its rotted pretty bad. I think the inner skin of those haines are fairly thick so he should be able to peel all the rotted wood away.
Apologies if Im a little behind on what is going on, Im still trying to finish the fitout on my rig lol